.findTheta |
Perform the EM algorithm of the Bayesian GLM fitting |
.getSqrtInvCpp |
Get the prewhitening matrix for a single data location |
.initialKP |
Find the initial values of kappa2 and phi |
.logDetQt |
Find the log of the determinant of Q_tilde |
act_prevalance |
Activations prevalence. |
aic_Param |
aic |
ar_order_Param |
ar_order |
ar_smooth_Param |
ar_smooth |
BayesGLM |
BayesGLM |
BayesGLM2 |
Group-level Bayesian GLM |
BayesGLM_cifti |
BayesGLM for CIFTI |
BayesGLM_group |
Group-level Bayesian GLM |
Bayes_Param |
Bayes |
cderiv |
Central derivative |
combine_sessions_Param |
combine_sessions |
contrasts_Param |
contrasts |
emTol_Param |
emTol |
EM_Param |
EM |
faces_Param |
faces |
HRF |
Canonical (double-gamma) HRF |
id_activations |
Identify task activations |
INLA_Description |
INLA |
is.BfMRI.sess |
Validate a '"BfMRI.sess"' object. |
make_HRFs |
Make HRFs |
make_mask |
Mask out invalid data |
make_mesh |
Make Mesh |
mask_Param_vertices |
mask: vertices |
max.threads_Param |
max.threads |
mesh_Param_either |
mesh: either |
mesh_Param_inla |
mesh: INLA only |
num.threads_Param |
num.threads |
plot.act_BayesGLM_cifti |
S3 method: use 'view_xifti_surface' to plot a '"act_BayesGLM_cifti"' object |
plot.BayesGLM2_cifti |
S3 method: use 'view_xifti_surface' to plot a '"BayesGLM2_cifti"' object |
plot.BayesGLM_cifti |
S3 method: use 'view_xifti_surface' to plot a '"BayesGLM_cifti"' object |
plot.prev_BayesGLM_cifti |
S3 method: use 'view_xifti' to plot a '"prev_BayesGLM_cifti"' object |
print.act_BayesGLM |
Summarize a '"act_BayesGLM"' object |
print.act_BayesGLM_cifti |
Summarize a '"act_BayesGLM_cifti"' object |
print.BayesGLM |
Summarize a '"BayesGLM"' object |
print.BayesGLM2 |
Summarize a '"BayesGLM2"' object |
print.BayesGLM2_cifti |
Summarize a '"BayesGLM2_cifti"' object |
print.BayesGLM_cifti |
Summarize a '"BayesGLM_cifti"' object |
print.prev_BayesGLM |
Summarize a '"prev_BayesGLM"' object |
print.prev_BayesGLM_cifti |
Summarize a '"prev_BayesGLM_cifti"' object |
print.summary.act_BayesGLM |
Summarize a '"act_BayesGLM"' object |
print.summary.act_BayesGLM_cifti |
Summarize a '"act_BayesGLM_cifti"' object |
print.summary.BayesGLM |
Summarize a '"BayesGLM"' object |
print.summary.BayesGLM2 |
Summarize a '"BayesGLM2"' object |
print.summary.BayesGLM2_cifti |
Summarize a '"BayesGLM2_cifti"' object |
print.summary.BayesGLM_cifti |
Summarize a '"BayesGLM_cifti"' object |
print.summary.prev_BayesGLM |
Summarize a '"prev_BayesGLM"' object |
print.summary.prev_BayesGLM_cifti |
Summarize a '"prev_BayesGLM_cifti"' object |
pw_estimate |
Estimate residual autocorrelation for prewhitening |
pw_smooth |
Smooth AR coefficients and white noise variance |
return_INLA_Param |
return_INLA |
scale_BOLD_Param |
scale_BOLD |
scale_design_Param |
scale_design |
seed_Param |
seed |
session_names_Param |
session_names |
summary.act_BayesGLM |
Summarize a '"act_BayesGLM"' object |
summary.act_BayesGLM_cifti |
Summarize a '"act_BayesGLM_cifti"' object |
summary.BayesGLM |
Summarize a '"BayesGLM"' object |
summary.BayesGLM2 |
Summarize a '"BayesGLM2"' object |
summary.BayesGLM2_cifti |
Summarize a '"BayesGLM2_cifti"' object |
summary.BayesGLM_cifti |
Summarize a '"BayesGLM_cifti"' object |
summary.prev_BayesGLM |
Summarize a '"prev_BayesGLM"' object |
summary.prev_BayesGLM_cifti |
Summarize a '"prev_BayesGLM_cifti"' object |
task_names_Param |
task_names |
trim_INLA_Param |
trim_INLA |
verbose_Param |
verbose |
vertex_areas |
Surface area of each vertex |
vertices_Param |
vertices |