Bayesian Survival Analysis for Right Censored Data


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Documentation for package ‘BayesSurvival’ version 0.2.0

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BayesSurv Compute the posterior mean and a credible band for the survival and cumulative hazard, and the posterior mean for the hazard.
CumhazEval Evaluate whether a true cumulative hazard function is contained in the credible set.
MCMCDepGammaFirst Sampler for the first interval for the piecewise exponential prior with dependent Gamma heights.
MCMCDepGammaIntermediate Sampler for the intermediate intervals for the piecewise exponential prior with dependent Gamma heights.
PlotBayesSurv Plot the posterior mean with credible band for the survival function or cumulative hazard, or the posterior mean for the hazard
RadiusCredibleSet Computes the radius of a fixed width credible set for the survival or the cumulative hazard
ReshapeData Reshape right censored data to be used with a piecewise exponential prior.
SamplePosteriorDepGamma Draw samples from the posterior for the hazard, using the piecewise exponential (histogram) prior with dependent Gamma heights
SamplePosteriorIndepGamma Draw samples from the posterior for the hazard, using the piecewise exponential (histogram) prior with independent Gamma heights
SurvEval Evaluate whether a true survival function is contained in the credible set.
SurvivalFromCumhaz Transform posterior draws from the cumulative hazard into posterior draws from the survival.