.plot_matrix {BayesFBHborrow}

Plot smoothed baseline hazards

Description

Plot mean and given quantiles of a matrix. Can also be used to plot derivatives of the baseline hazard, such as estimated cumulative hazard and survival function.

Usage

.plot_matrix(
  x_lim,
  y,
  percentiles = c(0.05, 0.95),
  title = "",
  xlab = "",
  ylab = "",
  color = "blue",
  fill = "blue",
  linewidth = 1,
  alpha = 0.2,
  y2 = NULL,
  color2 = "red",
  fill2 = "red"
)

Arguments

x_lim

time grid

y

samples

percentiles

percentiles to include in plot, default is c(0.025, 0.975)

title

optional, add title to plot

xlab

optional, add xlabel

ylab

optional, add ylabel

color

color of the mid line, default is blue

fill

color of the percentiles, default is blue

linewidth

thickness of the plotted line, default is 1

alpha

opacity of the percentiles, default is 0.2

y2

(optional) second set of samples for comparison

color2

(optional) color of the mid line, default is red

fill2

(optional) color of the percentiles, default is red

Value

a ggplot2 object