ccds.19 {BaySIC}R Documentation

CCDS Reference Data (Build hg19)

Description

A ref.dat object for the Consensus Coding Sequence (CCDS) data from UCSC human (Homo sapiens) build hg19

Usage

data(ccds.19)

Format

A data frame ref.dat object with 18305 genes on 34 variables (1 Gene column, 1 chromosome column, and 32 sequence context motifs

Details

Each sequence context motif column corresponds to the enumeration of CCDS bases in a given gene that satifies that motif. The gene column corresponds to HUGO gene ids.

Source

http://genome.ucsc.edu/

References

http://www.ncbi.nlm.nih.gov/CCDS/CcdsBrowse.cgi


[Package BaySIC version 1.0 Index]