Chronological Bayesian Models Integrating Optically Stimulated Luminescence and Radiocarbon Age Dating

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Documentation for package ‘BayLum’ version 0.3.2

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

BayLum-package	Chronological Bayesian Models Integrating Optically Stimulated Luminescence and C-14 Dating
AgeC14_Computation	Bayesian analysis for C-14 age estimations of various samples
AgeS	Output of 'AgeS_Computation' function for the samples: "GDB5" and "GDB3"
AgeS_Computation	Bayesian analysis for OSL age estimation of various samples
Age_Computation	Bayesian analysis for the OSL age estimation of one sample
Age_OSLC14	Bayesian analysis for age estimation of OSL measurements and C-14 ages of various samples
BayLum	Chronological Bayesian Models Integrating Optically Stimulated Luminescence and C-14 Dating
combine_DataFiles	Combine objects
Concat_DataFile	Combine objects
create_DataFile	Prepare input data for subsequent BayLum Analysis
create_FolderTemplates	Create Folder Templates
create_ThetaMatrix	Create Theta Matrix
DATA1	DATA of sample named GDB3
DATA2	DATA on sample named GDB5
DATA3	DATA of sample named FER1
DATA_C14	C14 cal age estiamte and its error
Generate_DataFile	Generates, from one (or several) BIN-file(s) of Single-grain OSL measurements, a list of luminescence data and information before statistical analysis (DEPRECATED)
Generate_DataFile-deprecated	Generates, from one (or several) BIN-file(s) of Single-grain OSL measurements, a list of luminescence data and information before statistical analysis (DEPRECATED)
Generate_DataFile_MG	Generates, from one (or several) BIN file(s) of Multi-grain OSL measurements a list of luminescence data and information before statistical analysis (DEPRECATED)
Generate_DataFile_MG-deprecated	Generates, from one (or several) BIN file(s) of Multi-grain OSL measurements a list of luminescence data and information before statistical analysis (DEPRECATED)
IntCal13	Atmospheric North data for calibration of 14C age
IntCal20	Atmospheric North data for calibration of 14C age
LT_RegenDose	Plots Lx/Tx as a function of the regenerative dose (DEPRECATED)
LT_RegenDose-deprecated	Plots Lx/Tx as a function of the regenerative dose (DEPRECATED)
Marine13	Marine data for calibration of 14C age
Marine20	Marine data for calibration of 14C age
MCMCsample	MCMC sample from the posterior distribution of the dataset GDB5
ModelC14	Likelihood of C14 samples for JAGS models use in 'Age_OSLC14'
ModelOSL	Likelihood of OSL samples for JAGS models use in 'Age_OSLC14'
ModelPrior	Prior for JAGS models use in 'Age_OSLC14'
Model_Age	JAGS models use in 'Age_Computation'
Model_AgeC14	JAGS models use in 'AgeC14_Computation'
Model_AgeS	JAGS models use in 'AgeS_Computation'
Model_Palaeodose	JAGS models use in 'Palaeodose_Computation'
Palaeodose_Computation	Bayesian analysis for the palaeodose estimation of various samples
plot_Ages	Create Age Plot
plot_MCMC	Plot MCMC trajectories and posterior distributions
plot_RegDosePoints	Plot Regeneration Dose Points
plot_Scatterplots	Display Scatter Plot Matrix of the Bayesian Age Results
ScatterSamples	Display Scatter Plot Matrix of the Bayesian Age Results
SCMatrix	Construct the Stratigraphic Constrain Matrix Interactively
SC_Ordered	Create Stratigraphically Ordered Sample Matrix
SHCal13	Atmospheric South data for calibration of 14C age
SHCal20	Atmospheric South data for calibration of 14C age
write_BayLumFiles	Write BayLum .csv-files
write_YAMLConfigFile	Write Auto Generated YAML BayLum Configuration File to the Disc