plotAbundance {BacArena}R Documentation

Plot abundances of species

Description

The function plotAbundance takes a list of simulations and return a boxplot with species abundances

Usage

plotAbundance(
  simlist,
  time = c(NULL, NULL),
  col = colpal3,
  return_dat = F,
  use_biomass = F
)

Arguments

simlist

A list of simulations (eval objects).

time

A vector with start and end time to be considered (default: total time)

col

Vector with color that should be used

return_dat

Should plain text mean abundances be returned? (default false)

use_biomass

If enabled then biomass is used instead of cell number


[Package BacArena version 1.8.2 Index]