diffusePDE {BacArena}R Documentation

Function for diffusion of the Substance matrix

Description

The generic function diffusePDE implements the diffusion by the solving diffusion equation.

Usage

diffusePDE(object, init_mat, gridgeometry, lrw = NULL, tstep)

## S4 method for signature 'Substance'
diffusePDE(object, init_mat, gridgeometry, lrw = NULL, tstep)

Arguments

object

An object of class Substance.

init_mat

A matrix with values to be used by the diffusion.

gridgeometry

A list specifying the geometry of the Arena

lrw

A numeric value needed by solver to estimate array size (by default lwr is estimated in simEnv() by the function estimate_lrw())

tstep

A numeric value giving the time step of integration

Details

Partial differential equation is solved to model 2d diffusion process in the arena.

See Also

Substance-class and diffuseR


[Package BacArena version 1.8.2 Index]