Bayesian Purity Model to Estimate Tumor Purity
![[R logo]](../../../doc/html/Rlogo.svg)
![[Up]](../../../doc/html/left.jpg)
![[Top]](../../../doc/html/up.jpg)
Documentation for package ‘BPM’ version 1.0.0
Help Pages
| BPM-package | BPM software package |
| annotGeneNames | gene names of probes in 450K array dat |
| ApiGetDMCs | Get TOPK=500 DMCs and non-DMCs using moderated-t test |
| BayPM | Bayesian Purity Model (BPM) Main functions. |
| BPM | BPM software package |
| estimateNu | Estimate noise intensity (nv) for non-DMCs, using maximum likelihood estmiation. |
| fullSampler | Sampling xi and alpha (tumor purity) |
| goodProbes | good probes in packages |
| simUCEC | Simulated data to illustrate datasets in packages |