| foxp2 {BMRMM} | R Documentation |
Simulated FoxP2 Data Set.
Description
A simulated data set of the original FoxP2 data set, which contains the sequences of syllables sung by male mice of different genotypes under various social contexts.
Usage
foxp2
Format
A data frame with 17391 rows and 6 variables:
- Id
Mouse Id
- Genotype
Genotype of the mouse, 1 = FoxP2 knocked out, 2 = wild type
- Context
Social context for the mouse, 1 = U (urine sample placed in the cage), 2 = L (living female mouse placed in the cage), 3 = A (an anesthetized female placed on the lid of the cage)
- Prev_State
The previous syllable, {1,2,3,4} = {d,m,s,u}
- Cur_State
The current syllable, {1,2,3,4} = {d,m,s,u}
- Transformed_ISI
Modified inter-syllable interval times, log(original ISI + 1)
References
Chabout, J., Sarkar, A., Patel, S. R., Radden, T., Dunson, D. B., Fisher, S. E., & Jarvis, E. D. (2016). A Foxp2 mutation implicated in human speech deficits alters sequencing of ultrasonic vocalizations in adult male mice. Frontiers in behavioral neuroscience, 10, 197.
Wu, Y., Jarvis E. D., & Sarkar, A. (2023). Bayesian semiparametric Markov renewal mixed models for vocalization syntax. Biostatistics, To appear.