A.wrapper {BIGDAWG}

Amino Acid Wrapper

Description

Wrapper function for amino acid analysis.

Usage

A.wrapper(
  loci,
  loci.ColNames,
  genos,
  grp,
  Exon,
  EPL,
  Cores,
  Strict.Bin,
  Output,
  Verbose
)

Arguments

loci

Loci being analyzed.

loci.ColNames

The column names of the loci being analyzed.

genos

Genotype table.

grp

Case/Control or Phenotype groupings.

Exon

Exon(s)for targeted analysis.

EPL

Protein Alignment List.

Cores

Number of cores to use for analysis.

Strict.Bin

Logical specify if strict rare cell binning should be used in ChiSq test

Output

Data return carryover from main BIGDAWG function

Verbose

Summary display carryover from main BIGDAWG function

Note

This function is for internal BIGDAWG use only.