loadIsAssociatedTo {BED}

Feeding BED: Load BE ID associations

Description

Not exported to avoid unintended modifications of the DB.

Usage

loadIsAssociatedTo(d, db1, db2, be = "Gene")

Arguments

d

a data.frame with information about the associations to be loaded. It should contain the following fields: "id1" and "id2". At the end id1 is associated to id2 (this way and not the other).

db1

the DB of id1

db2

the DB of id2

be

a character corresponding to the BE type (default: "Gene")

Details

When associating one id1 to id2, the BE identified by id1 is deleted after that its production edges have been transferred to the BE identified by id2. After this operation all id "corresponding_to" id1 do not directly identify any BE as they are supposed to do. Thus, to run this function with id1 involved in "corresponds_to" edges.