convBeIdLists {BED}R Documentation

Converts lists of BE IDs

Description

Converts lists of BE IDs

Usage

convBeIdLists(idList, entity = FALSE, ...)

Arguments

idList

a list of IDs lists

entity

if TRUE returns BE instead of BEID (default: FALSE). BE CAREFUL, THIS INTERNAL ID IS NOT STABLE AND CANNOT BE USED AS A REFERENCE. This internal identifier is useful to avoid biases related to identifier redundancy. See <../doc/BED.html#3_managing_identifiers>

...

params for the convBeIds function

Value

A list of convBeIds ouput ids. Scope ("be", "source" "organism" and "entity" (see Arguments)) is provided as a named list in the "scope" attributes: attr(x, "scope")

See Also

convBeIds, convDfBeIds

Examples

## Not run: 
convBeIdLists(
   idList=list(a=c("10", "100"), b=c("1000")),
   from="Gene",
   from.source="EntrezGene",
   from.org="human",
   to.source="Ens_gene"
)

## End(Not run)


[Package BED version 1.5.0 Index]