omicann {BEAMR}

Pediatric T-ALL Omics Annotation Data from COG trial AALL0434

Description

A subset of genomic lesion and RNA expression data from pediatric and young adult t-lineage acute lymphoblastic leukmia patients in the Children's Oncology Group trial AALL0434, published in Liu et al., 2017 Nature Genetics. This is the annotation mapping feature id to gene name given by Ensembl ID.

Usage

omicann

Format

omicann

A list with two data frames of omics annotation.

Lesion

A dataframe with 20 rows and 2 columns with lesion ID and Ensembl ID.

RNA

A dataframe with 20 rows and 2 columns with featue ID and Ensembl ID.

Source

https://www.nature.com/articles/ng.3909