compute_set_pvalues {BEAMR} | R Documentation |
Compute BEAMR p-values for sets
Description
Compute BEAMR p-values for sets
Usage
compute_set_pvalues(
beam.stats,
peel = FALSE,
z = TRUE,
alpha = 0.1,
mess.freq = 25
)
Arguments
beam.stats |
A beam.stats object from compute_beam_stats function |
peel |
Logical indicating whether to peel in p-value calculation |
z |
Logical indicating whether to z-scale each vector of one coefficient estimate across bootstraps before analysis |
alpha |
Maximum depth to peel (reduces computing time); default 0.1. |
mess.freq |
Message frequency; default 25. |
Value
A list with a data.frame of set p-values from BEAMR analysis, a data.frame of summary row p-values, and a data frame of set matching.
Examples
data(beam_stats_sm)
test.pvals <- compute_set_pvalues(beam.stats=beam_stats_sm)
[Package BEAMR version 1.1.0 Index]