lengthCDR3 {BCellMA}R Documentation

Frequency distribution of the CDR3 length

Description

Calculate length of CDR3.

Usage

lengthCDR3(data)

Arguments

data

"CDR3_IMGT_length" colums from IMGT/HighV-Quest table 1 coled "1_Summary.txt"

Value

Output Output is the number of amino acids in CDR3.

References

references Bischof J. and Ibrahim SM. bcRep: R Package for Comprehensive Analysis of B Cell Receptor Repertoire Data. PLoS One. 11(8):e0161569, 2016. doi: 10.1371/journal.pone.0161569.

Examples

data(IMGTtab1)
lenght_tab<-lengthCDR3(as.numeric(IMGTtab1$CDR3_IMGT_length))

[Package BCellMA version 0.3.4 Index]