Classification of RNA Sequences using Complex Network and Information Theory

[Up] [Top]

Documentation for package ‘BASiNETEntropy’ version 0.99.1

Help Pages

classify Performs the classification methodology using complex network and entropy theories
createedges Creates an untargeted graph from a biological sequence
creatingDataframe Creates a feature matrix using complex network topological measures
curveofentropy Creates an entropy curve
entropy Calculates the entropy
filtering Filters the edges
matrixmultiplication Compares the matrices
maxentropy Calculates the maximum entropy
preprocessing Rescales the results between values from 0 to 1
selectingEdges Selects the edges of the adjacency matrix
training Trains the algorithm to select the edges that maximize the entropy