preprocess_hmm_output {BALCONY}R Documentation

preprocess HMM output

Description

Preprocessing od HMMER output file to calculate CRE.

Usage

preprocess_hmm_output(hmm_out)

Arguments

hmm_out

path to ouptut file

Value

Returns list of

probabilities

probabilities extracted from file

alignment_positions

index of each alignment position

Author(s)

Michal Stolarczyk & Alicja Pluciennik

See Also

CRE_conservativity()

Examples

#No example due to external software requirements


[Package BALCONY version 0.2.10 Index]