delete_isoforms {BALCONY}R Documentation

Delete protein isoforms from alignment object

Description

This function searches for isoforms in the alignment object (entries with "-digit|" in the name) and deletes them

Usage

delete_isoforms(alignment)

Arguments

alignment

An object (S3) class alignment read with read.alignment function

Details

The isoforms are detected as entries with "-digit|" in the sequence name. If no isoforms are detected this function prints a "No isiforms detected" notification instead

Value

Alignment without isoforms - an object (S3) class alignment

Author(s)

Michal Stolarczyk & Alicja Pluciennik

See Also

read.alignment

Examples

data("alignment")
delete_isoforms(alignment)

[Package BALCONY version 0.2.10 Index]