Statistical Tests for Genetic Association Studies


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Documentation for package ‘AssotesteR’ version 0.1-10

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ASCORE ASCORE: Adaptive Score Test
ASCORE.Ord ASCORE: Adaptive Score Test
AssotesteR Statistical Tests for Genetic Association Studies
ASSU ASSU: Adaptive Sum of Squared Score U Statistic
ASSU.Ord ASSU: Adaptive Sum of Squared Score U Statistic
ASSUW ASSUW: Adaptive Sum of Squared Score U Statistic
ASSUW.Ord ASSUW: Adaptive Sum of Squared Score U Statistic
ASUM ASUM: Adaptive Sum Statistic
ASUM.Ord ASUM: Adaptive Sum Statistic
BST BST: Bayesian Score Test
CALPHA CALPHA: C-alpha Score Test
CARV CARV: Comprehrensive Approach to Analyzing Rare Variants
CAST CAST: Cohort Allelic Sums Test
CMAT CMAT: Cumulative Minor Allele Test
CMC CMC: Combined Multivariate and Collapsing Method
GDBR GDBR: Genomic Distance-Based Regression
genodata genodata
MULTI MULTI: Multiple Tests
ORWSS ORWSS: Odds Ratio Weighted Sum Statistic
RARECOVER RARECOVER Algorithm
RBT RBT: Replication Based Test
RVT1 RVT1: Rare Variant Test 1 for dichotomous traits
RVT2 RVT2: Rare Variant Test 2 for dichotomous traits
RWAS RWAS: Rare-Variant Weighted Aggregate Statistic
SCORE SCORE: Score Test (from Logistic Regression)
SEQSUM SEQSUM: Sequential Sum Score Test
SKAT SKAT: Sequence Kernel Association Test
SSU SSU: Sum of Squared Score U Statistic
SSUW SSUW: Weighted Sum of Squared Score U Statistic
SUM SUM: Sum Test
TTEST TTEST: Hotelling T2 Test
UMINP UMINP: Univariate minP (minimum p-value)
VT VT: Variable Threshold
WSS WSS: Weighted Sum Statistic
WST WST: Weighted Score Test