initSelectionCategories {AnaCoDa} | R Documentation |
initSelectionCategories
Description
Method of Parameter class (access via parameter$<function name>, where parameter is an object initialized by initializeParameterObject). Initialize values for selection CSP. File should be of comma-separated with header. Three columns should be of order Amino_acid,Codon,Value
Arguments
files |
list of files containing starting values. Number of files should equal the number of categories. |
numCategories |
number of mutation categories (should be less than or equal to number of mixtures) |
fix |
Can use this parameter to fix selection at current values (won't change over course of MCMC run) |
[Package AnaCoDa version 0.1.4.4 Index]