Haplotype Two Snips Out of a Paired Group of Patients


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Documentation for package ‘AlgebraicHaploPackage’ version 1.2

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AlgebraicHaploPackage-package AlgebraicHaploPackage- The package haplotype a contingency of two pairs of snips of a sample.
AlgebraicHaploPackage AlgebraicHaploPackage- The package haplotype a contingency of two pairs of snips of a sample.
callhaplotype calcultes the cotigency table of the haplotypes
cubic Function that can resolve the cubic equation numerical stable and any lower dimensional case except unsolvable cases.
findoptimal Chose the most likely solution of the three potential onces.
haplotypeit Haplotype a 3 x 3 counting matrix.
optimalfrequency Evaluate potential haplotypes.