Unscaled {ATNr} | R Documentation |
Store parameters and functions associated to the unscaled version of ATN
Description
Type the name of the class to see its methods
Fields
nb_s
Total number of species
nb_b
Number of basal species
c
double: interference competition
X
Vector of metabolic rates (length = number of species)
a
Matrix of attack rates (dim = number of species * number of consumers)
h
Matrix of handling times (dim = number of species * number of consumers)
e
Vector of assimilation efficiencies (length = number of species)
r
Vector of producers maximum growth rates (length = number of basal species)
BM
Vector of body masses (length = number of species)
dB
Vector of local derivatives (length = number of species)
fw
Adjacency matrix of the food-web (dim = number of species * number of species)
F
Matrix of per-capita feeding rates (dim = number of species * number of consumers)
q
hill exponent for the type of functional response
K
Carrying capacity of basal species
alpha
Plant resource competition
ext
Extinction threshold for species
ODE
Calculate the derivatives for the scaled version of the ATN model
Parameter: bioms - Local species biomasses
Parameter: t - Integration time point
Returns a vector of growth rate for each species at time t