geno.pine655 {ASRgenomics}

Genotypic data of 655 genotypes for loblolly pine dataset

Description

Genotypic data for a total of 4,853 SNPs (coded as 0, 1, 2 and -9 for missing) on 655 genotypes of Loblolly Pine (Pinus taeda L.). Dataset modified from supplementary material from Resende et al. (2012). This dataset differs from the original as some genotypes were made artificially missing by full-sib family.

Usage

geno.pine655

Format

matrix

References

Resende, M.F.R., Munoz, P. Resende, M.D.V., Garrick, D.J., Fernando, R.L., Davis, J.M., Jokela, E.J., Martin, T.A., Peter, G.F., and Kirst, M. 2012. Accuracy of genomic selection methods in a standard data set of loblolly pine (Pinus taeda L.). Genetics 190:1503-1510.

Examples

geno.pine655[1:5, 1:5]