Adaptive Lasso for the Cox Regression with Interval Censored and Possibly Left Truncated Data


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Documentation for package ‘ALassoSurvIC’ version 0.1.0

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ALassoSurvIC-package Variable selection procedure with the adaptive lasso for interval censored and possibly left truncated data
alacoxIC Performing variable selection with an adaptive lasso penalty for interval censored and possibly left truncated data
alacoxIC.default Performing variable selection with an adaptive lasso penalty for interval censored and possibly left truncated data
ALassoSurvIC-internal Internal functions for the ALassoSurvIC package
baseline Obtaining the nonparametric maximum likelihood estimate (NPMLE) for the baseline cumulative hazard function
baseline.default Obtaining the nonparametric maximum likelihood estimate (NPMLE) for the baseline cumulative hazard function
canon Internal functions for the ALassoSurvIC package
ex_IC Virtual data set for interval censored data
ex_ICLT Virtual data set for interval censored and left truncated data
fun_arglist Internal functions for the ALassoSurvIC package
fun_bic Internal functions for the ALassoSurvIC package
fun_covij Internal functions for the ALassoSurvIC package
fun_cov_parallel Internal functions for the ALassoSurvIC package
fun_ddq Internal functions for the ALassoSurvIC package
fun_dq Internal functions for the ALassoSurvIC package
fun_est_parallel Internal functions for the ALassoSurvIC package
fun_ew Internal functions for the ALassoSurvIC package
fun_hcross Internal functions for the ALassoSurvIC package
fun_less Internal functions for the ALassoSurvIC package
fun_penSurvIC Internal functions for the ALassoSurvIC package
fun_shooting_algorithm Internal functions for the ALassoSurvIC package
fun_subless Internal functions for the ALassoSurvIC package
fun_sublr Internal functions for the ALassoSurvIC package
fun_unpenSurvIC Internal functions for the ALassoSurvIC package
fun_updatelambda Internal functions for the ALassoSurvIC package
log_penlikelihood Internal functions for the ALassoSurvIC package
plot.alacoxIC Plot method for 'alacoxIC' object
plot.unpencoxIC Plot method for 'unpencoxIC' object
print.alacoxIC Performing variable selection with an adaptive lasso penalty for interval censored and possibly left truncated data
print.baseline Obtaining the nonparametric maximum likelihood estimate (NPMLE) for the baseline cumulative hazard function
print.unpencoxIC Performing unpenalized nonparametric maximum likelihood estimation for interval censored and possibly left truncated data
unpencoxIC Performing unpenalized nonparametric maximum likelihood estimation for interval censored and possibly left truncated data
unpencoxIC.default Performing unpenalized nonparametric maximum likelihood estimation for interval censored and possibly left truncated data