initialize,AFMImageAnalyser-method {AFM}R Documentation

Constructor method of AFMImageAnalyser Class.

Description

Constructor method of AFMImageAnalyser Class.

Usage

## S4 method for signature 'AFMImageAnalyser'
initialize(
  .Object,
  AFMImage,
  variogramAnalysis,
  psdAnalysis,
  fdAnalysis,
  gaussianMixAnalysis,
  networksAnalysis,
  threeDimensionAnalysis,
  mean,
  variance,
  TotalRrms,
  Ra,
  fullfilename
)

Arguments

.Object

an AFMImageAnalyser object

AFMImage

an AFMImage

variogramAnalysis

AFMImageVariogramAnalysis

psdAnalysis

AFMImagePSDAnalysis

fdAnalysis

AFMImageFractalDimensionsAnalysis

gaussianMixAnalysis

AFMImageGaussianMixAnalysis

networksAnalysis

AFMImageNetworksAnalysis

threeDimensionAnalysis

AFMImage3DModelAnalysis

mean

the mean of heights of the AFMImage

variance

the variance of heights of the AFMImage

TotalRrms

the total Root Mean Square Roughness of the AFMImage calculated from variance

Ra

mean roughness or mean of absolute values of heights

fullfilename

to be removed?


[Package AFM version 2.0 Index]